Linear vs GLM Models

User: Thava Alagu (thavamuni@gmail.com)
Created: 3/25/2025 20:13
Updated: 3/25/2025 21:45
Exported: 3/25/2025 22:58

Prompt:

In statistics, we have linear models, Generalized Linear Models, Non-Linear Models; What makes a model linear or non-linear ? What is the difference between linear model and generalized linear model ? Use examples if necessary.

Response:

What Makes a Model Linear or Non-Linear?

A model is considered linear if it is linear in parameters (coefficients), regardless of whether it is linear in features (predictors). This means the dependent variable (response) is a linear combination of the model’s parameters. If the model does not satisfy this condition, it is non-linear.

  • Linear Model: The model equation has the form:

    where:

    • is the response variable.

    • are predictors (independent variables).

    • are coefficients (parameters).

    • is the error term.

  • Non-Linear Model: At least one parameter appears in a non-linear way (e.g., squared, exponentiated, inside a sine function). Examples:

    • Exponential model:
    • Logistic model:
    • Polynomial model (quadratic, cubic, etc.):
      (This is linear in parameters, so it's actually a linear model!)

Difference Between Linear Model and Generalized Linear Model (GLM)

A Generalized Linear Model (GLM) extends the concept of linear models by allowing:

  1. Response variable to follow a non-normal distribution (e.g., Poisson, Binomial).
  2. A link function to transform the expected value of the response variable into a linear form.

Linear Model (LM)

  • Assumes normal distribution of residuals ( ).

  • Uses identity link function:

  • Example: Simple linear regression predicting house prices based on square footage.

Generalized Linear Model (GLM)

  • Relaxed distribution assumption: Response variable can be Poisson (count data), Binomial (probabilities), Gamma, etc.

  • Uses a link function to relate the mean of to the linear predictor:

  • Common GLMs:

    • Logistic Regression (Binary Outcomes, Binomial Distribution)

      (Logit link function)

    • Poisson Regression (Count Data, Poisson Distribution)

      (Log link function)

Key Takeaways

Feature Linear Model Generalized Linear Model (GLM)
Response Variable Continuous, Normal Can be Normal, Poisson, Binomial, Gamma, etc.
Link Function Identity ( ) Can be Log, Logit, Identity, etc.
Error Distribution Normal Flexible (Poisson, Binomial, etc.)
Example Predicting house price from square footage Predicting probability of customer churn

Summary

  • A model is linear if it is linear in parameters, even if predictors are transformed.
  • A Generalized Linear Model (GLM) is an extension of linear models that allows for different distributions and link functions.
  • Linear models assume normally distributed errors and use the identity link function, while GLMs allow for other distributions (like Poisson or Binomial) and use link functions to maintain linearity in the transformed mean.

Would you like an example implementation in Python? 🚀

Prompt:

I know Normal distribution. What is Poisson, Binomial and Gamma ?

Response:

Great! Since you already know the Normal distribution, let’s go over Poisson, Binomial, and Gamma distributions, which are commonly used in Generalized Linear Models (GLMs).


1️⃣ Poisson Distribution (Counts of Events)

The Poisson distribution models the number of times an event occurs in a fixed interval of time or space, assuming the events happen independently at a constant average rate.

📌 Key Properties:

  • Used for count data (e.g., number of customer calls per hour, number of website visits per day).
  • Only positive integer values (0, 1, 2, …).
  • Defined by a single parameter λ (lambda) = expected number of events per interval.

📊 Formula:

where:

  • = number of occurrences (0, 1, 2, …).

  • = average rate of occurrence per interval.

🔹 Example:

  • If a website gets 5 visitors per minute on average, the probability of exactly 3 visitors in a minute is:

🛠 Used in:

  • Poisson Regression (modeling event counts).
  • Predicting accidents per month, emails received per day, etc.

2️⃣ Binomial Distribution (Success/Failure)

The Binomial distribution models the number of successes in a fixed number of independent Bernoulli trials, where each trial has two possible outcomes: success (1) or failure (0).

📌 Key Properties:

  • Used when outcomes are binary (yes/no, pass/fail, click/no-click).

  • Defined by two parameters:

    • n = number of trials.
    • p = probability of success in a single trial.
  • Values range from 0 to n (number of successes).

📊 Formula:

where:

  • = number of successes.

  • = probability of success in one trial.

  • = total number of trials.

  • = number of ways to choose successes from trials.

🔹 Example:

  • If a basketball player scores a basket 70% of the time (p = 0.7) and takes 10 shots (n = 10), the probability of scoring exactly 7 times is:

🛠 Used in:

  • Logistic Regression (modeling binary outcomes like "churn or not").
  • Predicting customer purchases, click-through rates, disease presence (yes/no).

3️⃣ Gamma Distribution (Time Until an Event)

The Gamma distribution models the time until a certain number of events happen, assuming they occur continuously and independently.

📌 Key Properties:

  • Used for continuous, positive values (time, wait times, rainfall amounts).

  • Defined by two parameters:

    • Shape parameter (k) = number of events before stopping.
    • Scale parameter (θ, or 1/β) = average time between events.
  • A generalization of the Exponential distribution, which models only one event.

📊 Formula:

where:

  • = time until events occur.

  • = Gamma function (generalization of factorial).

🔹 Example:

  • If the average time between customer arrivals is 5 minutes ( ), and we want to know the probability that it takes more than 10 minutes for 2 customers to arrive:

    (where is the cumulative Gamma distribution).

🛠 Used in:

  • Modeling waiting times, e.g., time between earthquakes, time to failure of machines.
  • Insurance risk modeling, queueing theory.

🚀 Summary Table

Distribution Type of Data Parameters Used For
Normal Continuous (real numbers) Mean , Variance Heights, test scores, measurement errors
Poisson Counts (0, 1, 2, …) Rate Number of calls per hour, website visits
Binomial Integer (0 to ) , Number of heads in coin flips, customer conversions
Gamma Continuous, positive Shape , Scale Time until failure, waiting times

Would you like a visual representation of these distributions or a Python example? 😊

Prompt:

Explain GLM with concrete simple example with concrete link function and how it works.

Response:

Generalized Linear Models (GLM) - A Concrete Example

To understand Generalized Linear Models (GLM), let’s walk through an example using Poisson Regression, a common GLM.


Scenario: Predicting Customer Calls in a Call Center

📌 Problem:
A call center records the number of customer calls received per hour. We want to predict the expected number of calls based on the number of agents available.

  • Response Variable : Number of calls per hour (count data).
  • Predictor : Number of agents working during that hour.
  • Expected Relationship: More agents → More calls handled.
  • Error Distribution: Count data → Poisson distribution (because count data is non-negative and discrete).

Step 1: Choosing a GLM

Since the response variable (number of calls) is a count, we use Poisson Regression, which assumes:

where is the expected number of calls per hour.

💡 Why Poisson? The number of calls per hour is a non-negative integer (0, 1, 2, …) and follows a rate.


GLMs require a link function to relate the predictor (agents) to the expected value .
For Poisson regression, the log-link function is used:

🔹 This ensures that (expected count) remains positive because is always positive.


Step 3: Understanding How the Model Works

The GLM equation in our case is:

Rearrange to express :

🔹 Unlike a simple linear model, where , the log transformation ensures the predicted number of calls is always positive.


Step 4: Example Calculation

Assume we estimated our model and got:

  • If agents:

  • If agents:

🛠 Key Takeaway: The number of expected calls grows exponentially as the number of agents increases.


Step 5: Interpretation

  • → Baseline log-count when there are zero agents (not meaningful in practice).
  • → Each additional agent increases the expected calls by a factor of . This means hiring one more agent increases calls by 22% on average.

Step 6: Why Not Use a Linear Model?

A standard linear regression would assume:

  • This could predict negative call counts, which is meaningless.
  • The relationship is not linear (in practice, more agents improve service but at a decreasing rate).

By using a GLM with a log-link, we ensure predictions remain positive and reflect real-world exponential growth in counts.


Summary

Step Explanation
1. Select Distribution Poisson (for count data).
2. Choose Link Function Log-link: .
3. Build Model Fit parameters using training data.
4. Make Predictions Transform using .
5. Interpret Results Each agent increases call volume by 22%.

Final Thoughts

  • A linear model would fail for count data because it could predict negative values.

  • A GLM with a log-link function ensures the predicted call counts remain positive and capture real-world behavior.

  • Other GLMs work similarly:

    • Logistic Regression (Binary Outcomes, Logit Link).
    • Gamma Regression (Time Durations, Log Link).

Would you like a Python implementation of this example? 🚀

Prompt:

Explain another GLM Scenario, this time with logistic regression example.

Response:

Generalized Linear Model (GLM) – Logistic Regression Example

Let’s go through Logistic Regression, which is another type of Generalized Linear Model (GLM).


Scenario: Predicting Loan Default

📌 Problem:
A bank wants to predict whether a customer will default on a loan (Yes/No) based on their monthly income.

  • Response Variable : Loan default (Binary: 1 = Default, 0 = No Default).
  • Predictor : Monthly income (continuous variable).
  • Expected Relationship: Higher income → Lower chance of default.
  • Error Distribution: Binary outcomes → Bernoulli Distribution (success/failure).

Step 1: Choosing a GLM

Since the response variable is binary (0 or 1), we use Logistic Regression, which assumes:

where is the probability of default ( ).

💡 Why Bernoulli? The outcome is binary (Default = 1, No Default = 0).


GLMs require a link function to relate the predictor (income) to the probability .
For Logistic Regression, we use the logit function (log-odds):

🔹 This ensures that remains between 0 and 1, because probabilities must be within that range.

Rearrange to express :

This is the logistic function, which produces an S-shaped curve.


Step 3: Understanding How the Model Works

The GLM equation in our case is:

🔹 Unlike a linear model ( ), this model ensures probabilities are always between 0 and 1.


Step 4: Example Calculation

Assume we estimated the model and got:

  • If (monthly income = $40,000):

    Very high probability of NOT defaulting.

  • If (monthly income = $5,000):

    Still a high probability of NOT defaulting, but lower than before.

  • If (monthly income = $500):

    Now, there is a 38% chance of default.


Step 5: Interpretation

  • → Baseline log-odds of default when income is zero (not practical).
  • → Each additional $1 increase in income lowers the log-odds of default slightly.
  • → Each additional $1 increase in income decreases the odds of default by 0.5%.

Step 6: Why Not Use a Linear Model?

A standard linear regression would assume:

  • This could predict probabilities < 0 or > 1, which is invalid.
  • The relationship is not linear (income has diminishing effects on default probability).

By using a GLM with a logit-link, we ensure predictions remain valid probabilities and capture the S-shaped relationship between income and default risk.


Summary

Step Explanation
1. Select Distribution Bernoulli (binary data).
2. Choose Link Function Logit-link: .
3. Build Model Fit parameters using training data.
4. Make Predictions Transform using .
5. Interpret Results Higher income → Lower chance of default.

Final Thoughts

  • A linear model would fail because it could predict invalid probabilities.

  • A GLM with a logit-link function ensures the predicted default probability is between 0 and 1.

  • Logistic Regression is widely used for classification tasks like:

    • Spam detection (Spam = 1, Not Spam = 0).
    • Disease prediction (Has disease = 1, No disease = 0).
    • Customer churn (Churn = 1, Stay = 0).

Would you like a Python implementation of this example? 🚀

Prompt:

Just give me a python program which just plots Poisson, Binomial, Gamma probability density functions for visual illustration purpose.

Response:

Here’s a simple Python program that plots the Probability Density Function (PDF) of Poisson, Binomial, and Gamma distributions using matplotlib and scipy.stats. 🚀

import numpy as np
import matplotlib.pyplot as plt
import scipy.stats as stats

# Set figure size
plt.figure(figsize=(12, 4))

# 1. Poisson Distribution (λ = 4)
plt.subplot(1, 3, 1)
x_pois = np.arange(0, 15)  # Poisson takes discrete values
pois_pmf = stats.poisson.pmf(x_pois, mu=4)
plt.stem(x_pois, pois_pmf, basefmt=" ", use_line_collection=True)
plt.title("Poisson Distribution (λ=4)")
plt.xlabel("k")
plt.ylabel("P(X=k)")

# 2. Binomial Distribution (n=10, p=0.5)
plt.subplot(1, 3, 2)
x_binom = np.arange(0, 11)
binom_pmf = stats.binom.pmf(x_binom, n=10, p=0.5)
plt.stem(x_binom, binom_pmf, basefmt=" ", use_line_collection=True)
plt.title("Binomial Distribution (n=10, p=0.5)")
plt.xlabel("k")
plt.ylabel("P(X=k)")

# 3. Gamma Distribution (α=2, β=1)
plt.subplot(1, 3, 3)
x_gamma = np.linspace(0, 10, 100)
gamma_pdf = stats.gamma.pdf(x_gamma, a=2, scale=1)
plt.plot(x_gamma, gamma_pdf, color="r")
plt.title("Gamma Distribution (α=2, β=1)")
plt.xlabel("x")
plt.ylabel("f(x)")

plt.tight_layout()
plt.show()

Explanation

  1. Poisson Distribution (λ = 4)

    • Models count data (discrete).
    • Example: Number of customer calls per hour.
  2. Binomial Distribution (n = 10, p = 0.5)

    • Models number of successes in n trials.
    • Example: Number of heads in 10 coin flips.
  3. Gamma Distribution (α = 2, β = 1)

    • Models waiting times (continuous).
    • Example: Time until an event (e.g., failure of a machine).

🔹 Poisson and Binomial use PMF (probability mass function), while Gamma uses PDF (probability density function).

Would you like modifications, like changing parameters dynamically? 🚀

Prompt:

Now I understood LM and GLM; Now give concrete example of truly non-linear model (not a GLM) with explanation.

Response:

Truly Non-Linear Model (Not a GLM)

A non-linear model is one where the relationship between the predictors and the response cannot be expressed as a linear combination of parameters. Unlike GLMs, which use transformations to maintain a linear structure, truly non-linear models have parameters that appear in non-linear ways.


Concrete Example: Growth Curve Model (Logistic Growth Model)

Let’s consider a logistic growth model, often used in population dynamics or disease spread.

Scenario: Predicting Bacterial Growth Over Time

  • Response Variable : Population size (number of bacteria).
  • Predictor : Time (hours).
  • Expected Relationship: Initially, bacteria multiply exponentially, but later, growth slows down due to resource limitations.

A linear or GLM approach would fail because bacterial growth is not linear—it follows an S-shaped (sigmoid) curve.


Non-Linear Model: Logistic Growth Function

A commonly used non-linear model for population growth is the logistic growth model:

where:

  • = population at time .

  • = carrying capacity (maximum population size).

  • = controls initial population size.

  • = growth rate.

  • = Euler’s number (~2.718).


Why Is This Non-Linear?

Unlike GLMs, parameters appear inside an exponent and division, making it impossible to rewrite in a linear form:

  • Linear models & GLMs: (parameters in a simple sum/product).
  • Non-Linear model: (parameters inside exponent and denominator).

This cannot be transformed into a linear form, so it’s truly non-linear.


Python Code to Fit & Plot the Model

Here’s how to simulate bacterial growth data and fit a non-linear logistic model:

import numpy as np
import matplotlib.pyplot as plt
from scipy.optimize import curve_fit

# Simulated data: Time (hours) and observed bacterial population
time = np.linspace(0, 10, 20)  # 20 time points from 0 to 10 hours
true_K = 1000  # Carrying capacity
true_beta0 = -2
true_beta1 = 1.2

# Logistic Growth Function (used for generating synthetic data)
def logistic_growth(t, K, beta0, beta1):
    return K / (1 + np.exp(-(beta0 + beta1 * t)))

# Simulated bacterial growth data with some noise
population = logistic_growth(time, true_K, true_beta0, true_beta1) + np.random.normal(0, 30, len(time))

# Fit the non-linear model using curve_fit
popt, _ = curve_fit(logistic_growth, time, population, p0=[1200, -1, 1])

# Plotting
plt.figure(figsize=(6, 4))
plt.scatter(time, population, label="Observed Data", color="red")
plt.plot(time, logistic_growth(time, *popt), label="Fitted Logistic Model", color="blue")
plt.xlabel("Time (hours)")
plt.ylabel("Population Size")
plt.title("Non-Linear Logistic Growth Model")
plt.legend()
plt.show()

Interpretation

  • The logistic function starts slow, grows rapidly, and then levels off.

  • The fitted model gives estimates for:

    • (maximum population limit).
    • (affects initial population).
    • (controls growth speed).
  • Unlike linear regression or GLMs, this model cannot be rewritten as a simple linear equation.


Key Takeaways

Feature GLM (e.g., Logistic Regression) Non-Linear Model (Logistic Growth)
Equation Logit link function Growth curve
Linear in Parameters? Yes No (parameters inside exponent and fraction)
Transformable to Linear? Yes No
Example Use Case Binary classification (Spam detection, loan default) Population growth, epidemiology

Final Thoughts

🚀 This logistic growth model is a truly non-linear model because:
✔️ Parameters appear in a non-linear way (exponents, fractions).
✔️ It cannot be transformed into a linear or GLM form.
✔️ Requires non-linear optimization techniques (like curve_fit) to estimate parameters.

Would you like another non-linear example, like neural networks or exponential decay? 🤖📈


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